prider: Multiplexed Primer Design by Linear Set Coverage Approximation

Implementation of an oligonucleotide primer and probe design algorithm using a linearly scaling approximation of set coverage. A detailed description available at Smolander and Tamminen, 2021; <doi:10.1101/2021.09.06.459073>.

Version: 1.0.4
Imports: Rcpp (≥ 1.0.5), dplyr, tidyr, purrr, stringr, magrittr, tibble, blaster, gplots
LinkingTo: Rcpp
Published: 2022-03-11
Author: Manu Tamminen ORCID iD [aut, cre], Niina Smolander ORCID iD [aut]
Maintainer: Manu Tamminen <mavatam at>
License: BSD_3_clause + file LICENSE
NeedsCompilation: yes
SystemRequirements: C++11
Materials: README
CRAN checks: prider results


Reference manual: prider.pdf


Package source: prider_1.0.4.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): prider_1.0.4.tgz, r-oldrel (arm64): prider_1.0.4.tgz, r-release (x86_64): prider_1.0.4.tgz, r-oldrel (x86_64): prider_1.0.4.tgz
Old sources: prider archive


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