chromConverter

chromConverter is an R package to facilitate the conversion of chromatographic data from proprietary binary formats.

It currently consists of a wrapper around the file parsers included in the Aston package for python.

This includes Agilent ChemStation .uv, .ms, MassHunter .sp, etc.

Installation

The development version of chromConverter is hosted on GitHub. You can install it using devtools as follows:

install.packages("devtools")
devtools::install_github("https://github.com/ethanbass/chromConverter/")

Usage

Convert files by specifying the path to a directory (or a vector of directories) and the appropriate file format.

library(chromConverter)
dat <- read_chroms(path, format.in=c("chemstation.uv", "masshunter.dad")