MiMIR: Metabolomics-Based Models for Imputing Risk
Provides an intuitive framework for ad-hoc statistical analysis of 1H-NMR metabolomics by Nightingale Health. It allows to easily explore new metabolomics measurements assayed by Nightingale Health, comparing the distributions with a large Consortium (BBMRI-nl); project previously published metabolic scores [<doi:10.1016/j.ebiom.2021.103764>, <doi:10.1161/CIRCGEN.119.002610>, <doi:10.1038/s41467-019-11311-9>, <doi:10.7554/eLife.63033>, <doi:10.1161/CIRCULATIONAHA.114.013116>, <doi:10.1007/s00125-019-05001-w>]; and calibrate the metabolic surrogate values to a desired dataset.
| Version: | 1.2 |
| Depends: | R (≥ 4.1.0) |
| Imports: | caret, DT, foreach, ggplot2, glmnet, heatmaply, matrixStats, pkgload, plotly, plyr, pROC, purrr, shiny, shinycssloaders, shinyFiles, shinydashboard, shinyjs, shinyWidgets, stats, survival, survminer, dplyr |
| Suggests: | ggfortify, knitr, rmarkdown |
| Published: | 2022-04-15 |
| Author: | Daniele Bizzarri 
[aut, cre],
Marcel Reinders
[aut, ths],
Marian Beekman
[aut],
Pieternella Eline Slagboom
[aut, ths],
Erik van den Akker
[aut, ths] |
| Maintainer: | Daniele Bizzarri <d.bizzarri at lumc.nl> |
| License: | GPL-3 |
| NeedsCompilation: | no |
| Materials: | README NEWS |
| CRAN checks: | MiMIR results |
Documentation:
| Reference manual: | MiMIR.pdf |
Downloads:
| Package source: | MiMIR_1.2.tar.gz |
| Windows binaries: | r-devel: MiMIR_1.2.zip, r-release: MiMIR_1.2.zip, r-oldrel: not available |
| macOS binaries: | r-release (arm64): MiMIR_1.2.tgz, r-oldrel (arm64): MiMIR_1.2.tgz, r-release (x86_64): MiMIR_1.2.tgz, r-oldrel (x86_64): MiMIR_1.2.tgz |
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