MiMIR: Metabolomics-Based Models for Imputing Risk

Provides an intuitive framework for ad-hoc statistical analysis of 1H-NMR metabolomics by Nightingale Health. It allows to easily explore new metabolomics measurements assayed by Nightingale Health, comparing the distributions with a large Consortium (BBMRI-nl); project previously published metabolic scores [<doi:10.1016/j.ebiom.2021.103764>, <doi:10.1161/CIRCGEN.119.002610>, <doi:10.1038/s41467-019-11311-9>, <doi:10.7554/eLife.63033>, <doi:10.1161/CIRCULATIONAHA.114.013116>, <doi:10.1007/s00125-019-05001-w>]; and calibrate the metabolic surrogate values to a desired dataset.

Version: 1.2
Depends: R (≥ 4.1.0)
Imports: caret, DT, foreach, ggplot2, glmnet, heatmaply, matrixStats, pkgload, plotly, plyr, pROC, purrr, shiny, shinycssloaders, shinyFiles, shinydashboard, shinyjs, shinyWidgets, stats, survival, survminer, dplyr
Suggests: ggfortify, knitr, rmarkdown
Published: 2022-04-15
Author: Daniele Bizzarri ORCID iD [aut, cre], Marcel Reinders ORCID iD [aut, ths], Marian Beekman ORCID iD [aut], Pieternella Eline Slagboom ORCID iD [aut, ths], Erik van den Akker ORCID iD [aut, ths]
Maintainer: Daniele Bizzarri <d.bizzarri at lumc.nl>
License: GPL-3
NeedsCompilation: no
Materials: README NEWS
CRAN checks: MiMIR results

Documentation:

Reference manual: MiMIR.pdf

Downloads:

Package source: MiMIR_1.2.tar.gz
Windows binaries: r-devel: MiMIR_1.2.zip, r-release: MiMIR_1.2.zip, r-oldrel: not available
macOS binaries: r-release (arm64): MiMIR_1.2.tgz, r-oldrel (arm64): MiMIR_1.2.tgz, r-release (x86_64): MiMIR_1.2.tgz, r-oldrel (x86_64): MiMIR_1.2.tgz

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