powerHaDeX: Efficient Simulation of HDX-MS Data and Tools for the Statistical Analysis

Facilitates simulating and analyzing data coming from HDX-MS experiments along with the possibility of comparing the power of the tests verifying differences in the levels of deuterium uptake. The simulation of mass spectra is a fast version of <https://github.com/kanzy/HX-MS-Simulations>.

Version: 1.0
Depends: R (≥ 3.5.0)
Imports: checkmate, data.table, expm, ggplot2, glmnet, lme4, lmerTest, methods, nlme, plyr, Rcpp (≥ 1.0.3), signal
LinkingTo: Rcpp
Suggests: testthat, spelling, knitr, rmarkdown, covr
Published: 2022-01-24
Author: Krystyna Grzesiak [cre, aut], Mateusz Staniak [aut], Michal Burdukiewicz ORCID iD [ctb]
Maintainer: Krystyna Grzesiak <krygrz11 at gmail.com>
License: GPL (≥ 3)
NeedsCompilation: yes
Language: en-US
Materials: README
CRAN checks: powerHaDeX results

Documentation:

Reference manual: powerHaDeX.pdf
Vignettes: Example_simulation
Simulation_description

Downloads:

Package source: powerHaDeX_1.0.tar.gz
Windows binaries: r-devel: powerHaDeX_1.0.zip, r-release: powerHaDeX_1.0.zip, r-oldrel: powerHaDeX_1.0.zip
macOS binaries: r-release (arm64): powerHaDeX_1.0.tgz, r-release (x86_64): powerHaDeX_1.0.tgz, r-oldrel: powerHaDeX_1.0.tgz

Linking:

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