grantham: Calculate the 'Grantham' Distance

A minimal set of routines to calculate the 'Grantham' distance <doi:10.1126/science.185.4154.862>. The 'Grantham' distance attempts to provide a proxy for the evolutionary distance between two amino acids based on three key chemical properties: composition, polarity and molecular volume. In turn, evolutionary distance is used as a proxy for the impact of missense mutations. The higher the distance, the more deleterious the substitution is expected to be.

Version: 0.1.1
Depends: R (≥ 2.10)
Imports: tibble, magrittr, vctrs, dplyr, tidyr, rlang, stringr
Suggests: spelling
Published: 2022-01-07
Author: Ramiro Magno ORCID iD [aut, cre], Isabel Duarte ORCID iD [aut], Ana-Teresa Maia ORCID iD [aut], CINTESIS [cph, fnd]
Maintainer: Ramiro Magno <ramiro.magno at gmail.com>
BugReports: https://github.com/maialab/grantham/issues
License: MIT + file LICENSE
URL: https://maialab.org/grantham/, https://github.com/maialab/grantham
NeedsCompilation: no
Language: en-US
Materials: README NEWS
CRAN checks: grantham results

Documentation:

Reference manual: grantham.pdf

Downloads:

Package source: grantham_0.1.1.tar.gz
Windows binaries: r-devel: grantham_0.1.1.zip, r-release: grantham_0.1.1.zip, r-oldrel: grantham_0.1.1.zip
macOS binaries: r-release (arm64): grantham_0.1.1.tgz, r-release (x86_64): grantham_0.1.1.tgz, r-oldrel: grantham_0.1.1.tgz
Old sources: grantham archive

Reverse dependencies:

Reverse imports: agvgd

Linking:

Please use the canonical form https://CRAN.R-project.org/package=grantham to link to this page.