PhaseTypeR: General-Purpose Phase-Type Functions

General implementation of core function from phase-type theory. 'PhaseTypeR' can be used to model continuous and discrete phase-type distributions, both univariate and multivariate. The package includes functions for outputting the mean and (co)variance of phase-type distributions; their density, probability and quantile functions; functions for random draws; functions for reward-transformation; and functions for plotting the distributions as networks. For more information on these functions please refer to Bladt and Nielsen (2017, ISBN: 978-1-4939-8377-3) and Campillo Navarro (2019) <https://orbit.dtu.dk/en/publications/order-statistics-and-multivariate-discrete-phase-type-distributio>.

Version: 1.0.2
Depends: expm, igraph, methods
Suggests: knitr, partitions, rmarkdown, testthat
Published: 2022-02-10
Author: Iker Rivas-González ORCID iD [aut, cre], Asger Hobolth [aut], Lars Nørvang Andersen [aut], Colin Guetemme [aut]
Maintainer: Iker Rivas-González <ikerrivas96 at gmail.com>
BugReports: https://github.com/rivasiker/PhaseTypeR/issues
License: GPL-3
URL: https://rivasiker.github.io/PhaseTypeR/, https://github.com/rivasiker/PhaseTypeR
NeedsCompilation: no
Materials: README NEWS
CRAN checks: PhaseTypeR results

Documentation:

Reference manual: PhaseTypeR.pdf
Vignettes: PhaseTypeR
Using PhaseTypeR for population genetics
Using PhaseTypeR for the site frequency spectrum

Downloads:

Package source: PhaseTypeR_1.0.2.tar.gz
Windows binaries: r-devel: PhaseTypeR_1.0.2.zip, r-release: PhaseTypeR_1.0.2.zip, r-oldrel: PhaseTypeR_1.0.2.zip
macOS binaries: r-release (arm64): PhaseTypeR_1.0.2.tgz, r-release (x86_64): PhaseTypeR_1.0.2.tgz, r-oldrel: PhaseTypeR_1.0.2.tgz
Old sources: PhaseTypeR archive

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