A collection of functions to facilitate analysis of proteomic data
from Olink, primarily NPX data that has been exported from Olink NPX
Manager or MyData. The functions also work on QUANT data from Olink by log-
transforming the QUANT data. The functions are focused on reading data,
facilitating data wrangling and quality control analysis, performing
statistical analysis and generating figures to visualize the results of
the statistical analysis. The goal of this package is to help users extract
biological insights from proteomic data run on the Olink platform.
| Version: |
3.0.0 |
| Depends: |
R (≥ 3.6.0) |
| Imports: |
car, broom, dplyr, emmeans, forcats, generics, ggplot2, ggpubr, ggrepel, grDevices, grid, lme4, lmerTest, magrittr, methods, readxl, rlang, stats, stringr, tibble, tidyr, tidyselect, tools, utils |
| Suggests: |
extrafont, knitr, rmarkdown, testthat (≥ 3.0.0), scales, markdown, vdiffr |
| Published: |
2022-02-10 |
| Author: |
Kathleen Nevola 
[aut, cre] (kathy-nevola),
Marianne Sandin
[aut] (marisand),
Jamey Guess [aut]
(jrguess),
Simon Forsberg
[aut] (simfor),
Christoffer Cambronero [aut] (Orbmac),
Pascal Pucholt
[aut] (AskPascal),
Boxi Zhang [ctb]
(boxizhang),
Per Eriksson
[ctb] (b_watcher),
Klev Diamanti
[ctb] (klevdiamanti),
Emmett Sprecher
[ctb],
Jessica Barbagallo [ctb] (jbarbagallo),
Olof Mansson [ctr] (olofmansson),
Ola Caster [ctb] (OlaCaster),
Olink [cph, fnd] |
| Maintainer: |
Kathleen Nevola <biostattools at olink.com> |
| License: |
GPL-3 |
| NeedsCompilation: |
no |
| Materials: |
NEWS |
| CRAN checks: |
OlinkAnalyze results |