MitoHEAR: Quantification of Mitochondrial DNA Heteroplasmy

Allows the estimation and downstream statistical analysis of the mitochondrial DNA Heteroplasmy calculated from single-cell datasets <https://github.com/ScialdoneLab/MitoHEAR/tree/master>.

Version: 0.1.0
Depends: R (≥ 4.0)
Imports: Biostrings, circlize, ComplexHeatmap, dynamicTreeCut, GenomicRanges, ggplot2, gridExtra, IRanges, magrittr, mcclust, rdist, reshape2, rlist, Rsamtools
Suggests: clustree, fmsb, gam, karyoploteR, knitr, plotly, regioneR, rmarkdown, testthat
Published: 2022-03-01
Author: Gabriele Lubatti
Maintainer: Gabriele Lubatti <gabriele.lubatti at helmholtz-muenchen.de>
License: Artistic-2.0
NeedsCompilation: no
Materials: README
CRAN checks: MitoHEAR results

Documentation:

Reference manual: MitoHEAR.pdf
Vignettes: MitoHEAR

Downloads:

Package source: MitoHEAR_0.1.0.tar.gz
Windows binaries: r-devel: MitoHEAR_0.1.0.zip, r-release: MitoHEAR_0.1.0.zip, r-oldrel: MitoHEAR_0.1.0.zip
macOS binaries: r-release (arm64): MitoHEAR_0.1.0.tgz, r-release (x86_64): MitoHEAR_0.1.0.tgz, r-oldrel: MitoHEAR_0.1.0.tgz

Linking:

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