GWASinlps: Nonlocal Prior Based Iterative SNP Selection Tool for Genome-Wide Association Studies

Performs variable selection with data from Genome-wide association studies (GWAS) combining, in an iterative variable selection framework, the computational efficiency of the screen-and-select approach based on some association learning and the parsimonious uncertainty quantification provided by the use of nonlocal priors, as described in Sanyal et al. (2018).

Version: 1.2
Depends: mombf, speedglm
Imports: horseshoe
Suggests: glmnet
Published: 2018-07-19
Author: Nilotpal Sanyal [aut, cre]
Maintainer: Nilotpal Sanyal <nilotpal.sanyal at>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
Materials: ChangeLog
CRAN checks: GWASinlps results


Reference manual: GWASinlps.pdf


Package source: GWASinlps_1.2.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): GWASinlps_1.2.tgz, r-release (x86_64): GWASinlps_1.2.tgz, r-oldrel: GWASinlps_1.2.tgz
Old sources: GWASinlps archive


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