backbone: Extracts the Backbone from Weighted Graphs
Provides methods for extracting from a weighted graph
a binary or signed backbone that retains only the significant edges.
The user may input a weighted graph, or a bipartite graph
from which a weighted graph is first constructed via projection.
Backbone extraction methods include the stochastic degree sequence model (SDSM; Neal, Z. P. (2014). <doi:10.1016/j.socnet.2014.06.001>),
the fixed degree sequence model (FDSM; Zweig, K. A., and Kaufmann, M. (2011). <doi:10.1007/s13278-011-0021-0>),
the fixed row model (FRM; Neal, Z. P. (2013). <doi:10.1007/s13278-013-0107-y>),
the fixed column model (FCM; Neal, Domagalski, and Sagan (2021). <arXiv:2105.13396>),
the fixed fill model (FFM; Neal, Domagalski, and Sagan (2021). <arXiv:2105.13396>),
and a universal threshold method.
| Version: |
1.5.1 |
| Depends: |
R (≥ 2.10) |
| Imports: |
Matrix, methods, stats, utils, igraph, network, PoissonBinomial |
| Suggests: |
knitr, rmarkdown, testthat |
| Published: |
2021-09-17 |
| Author: |
Zachary Neal [aut, cre],
Rachel Domagalski [aut],
Bruce Sagan [aut] |
| Maintainer: |
Zachary Neal <zpneal at msu.edu> |
| BugReports: |
https://github.com/domagal9/backbone/issues |
| License: |
GPL-3 |
| URL: |
https://www.zacharyneal.com/backbone,
https://github.com/domagal9/backbone |
| NeedsCompilation: |
no |
| Citation: |
backbone citation info |
| Materials: |
README NEWS |
| CRAN checks: |
backbone results |
Documentation:
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