RareComb: Combinatorial and Statistical Analyses of Rare Events

A custom implementation of the apriori algorithm and binomial tests to identify combinations of features (genes, variants etc) significantly enriched for simultaneous mutations/events from sparse Boolean input, see Vijay Kumar Pounraja, Santhosh Girirajan (2021). <doi:10.1101/2021.10.01.462832>.

Version:	1.0
Depends:	R (≥ 2.10)
Imports:	magrittr, arules, dplyr, methods, pwr, stringr, tidyr, reshape2, sqldf
Published:	2021-10-06
Author:	Vijay Kumar Pounraja [aut, cre]
Maintainer:	Vijay Kumar Pounraja <vijaykumar.mp at gmail.com>
License:	MIT + file LICENSE
NeedsCompilation:	no
Materials:	README
CRAN checks:	RareComb results

Documentation:

Reference manual:

RareComb.pdf

Downloads:

Package source:	RareComb_1.0.tar.gz
Windows binaries:	r-devel: RareComb_1.0.zip, r-release: RareComb_1.0.zip, r-oldrel: RareComb_1.0.zip
macOS binaries:	r-release (arm64): RareComb_1.0.tgz, r-release (x86_64): RareComb_1.0.tgz, r-oldrel: RareComb_1.0.tgz

Linking:

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