DSAIRM: Dynamical Systems Approach to Immune Response Modeling

Simulation models (apps) of various within-host immune response scenarios. The purpose of the package is to help individuals learn about within-host infection and immune response modeling from a dynamical systems perspective. All apps include explanations of the underlying models and instructions on what to do with the models. The development of this package was partially supported by NIH grant U19AI117891.

Version: 0.8.6
Depends: R (≥ 3.5), shiny (≥ 1.0)
Imports: adaptivetau (≥ 2.2), boot (≥ 1.3-20), deSolve (≥ 1.20), dplyr (≥ 0.7.4), ggplot2 (≥ 2.2.1), gridExtra (≥ 2.3), lhs (≥ 0.15), nloptr (≥ 1.0.4), plotly, rlang, stats, tidyr, utils (≥ 3.4), XML (≥ 3.98)
Suggests: covr, devtools, knitr, pkgdown, rmarkdown, roxygen2, testthat
Published: 2020-07-14
Author: Andreas Handel ORCID iD [aut, cre], Yang Ge [ctb], Spencer Hall [ctb], Sina Solaimanpour [ctb], Henok Woldu [ctb]
Maintainer: Andreas Handel <ahandel at uga.edu>
BugReports: https://github.com/ahgroup/DSAIRM/issues
License: GPL-3
URL: https://ahgroup.github.io/DSAIRM, https://github.com/ahgroup/DSAIRM/
NeedsCompilation: no
Citation: DSAIRM citation info
Materials: NEWS
CRAN checks: DSAIRM results


Reference manual: DSAIRM.pdf
Vignettes: DSAIRM Package Tutorial
Package source: DSAIRM_0.8.6.tar.gz
Windows binaries: r-devel: DSAIRM_0.8.6.zip, r-release: DSAIRM_0.8.6.zip, r-oldrel: DSAIRM_0.8.2.zip
macOS binaries: r-release: DSAIRM_0.8.6.tgz, r-oldrel: DSAIRM_0.8.2.tgz
Old sources: DSAIRM archive


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