gaston: Genetic Data Handling (QC, GRM, LD, PCA) & Linear Mixed Models

Manipulation of genetic data (SNPs). Computation of GRM and dominance matrix, LD, heritability with efficient algorithms for linear mixed model (AIREML). Dandine et al <doi:10.1159/000488519>.

Version: 1.5.6
Depends: Rcpp, RcppParallel, methods
LinkingTo: Rcpp, RcppParallel, RcppEigen
Suggests: knitr
Published: 2020-02-26
Author: Hervé Perdry [cre, aut, cph], Claire Dandine-Roulland [aut, cph], Deepak Bandyopadhyay [cph] (C++ gzstream class), Lutz Kettner [cph] (C++ gzstream class)
Maintainer: Hervé Perdry <herve.perdry at u-psud.fr>
License: GPL-3
NeedsCompilation: yes
Materials: NEWS
CRAN checks: gaston results

Downloads:

Reference manual: gaston.pdf
Vignettes: gaston faq
gaston package
Package source: gaston_1.5.6.tar.gz
Windows binaries: r-prerelease: gaston_1.5.6.zip, r-release: gaston_1.5.6.zip, r-oldrel: gaston_1.5.6.zip
macOS binaries: r-prerelease: gaston_1.5.6.tgz, r-release: gaston_1.5.6.tgz, r-oldrel: gaston_1.5.6.tgz
Old sources: gaston archive

Reverse dependencies:

Reverse depends: milorGWAS
Reverse imports: rNeighborGWAS
Reverse linking to: milorGWAS
Reverse suggests: bigsnpr

Linking:

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