Simulation tools for management strategy evaluation are provided for the 'DLMtool' operating model to inform data-rich fisheries. 'MSEtool' provides complementary assessment models of varying complexity with standardized reporting, diagnostic tools for evaluating assessment models within closed-loop simulation, and helper functions for building more complex operating models and management procedures.
| Version: | 1.5.0 |
| Depends: | R (≥ 3.3.0), DLMtool (≥ 5.3.1) |
| Imports: | MASS, TMB, coda, corpcor, dplyr, gplots, grDevices, graphics, methods, mvtnorm, reshape2, snowfall, stats, utils, abind, rmarkdown |
| LinkingTo: | TMB, RcppEigen |
| Suggests: | knitr, testthat, r4ss, shiny |
| Published: | 2020-03-24 |
| Author: | Quang Huynh [aut], Tom Carruthers [aut, cre], Adrian Hordyk [aut], Chris Grandin [ctb] (iSCAM functions) |
| Maintainer: | Tom Carruthers <t.carruthers at oceans.ubc.ca> |
| BugReports: | https://github.com/tcarruth/MSEtool/issues |
| License: | GPL-3 |
| URL: | http://www.datalimitedtoolkit.org |
| NeedsCompilation: | yes |
| Materials: | README NEWS |
| CRAN checks: | MSEtool results |
| Reference manual: | MSEtool.pdf |
| Vignettes: |
Delay-difference and delay-differential models User guide to MSEtool Statistical catch-at-age (SCA) model SRA model for conditioning operating models Surplus production model Virtual population analysis (VPA) model User guide for multiMSE |
| Package source: | MSEtool_1.5.0.tar.gz |
| Windows binaries: | r-prerelease: MSEtool_1.5.0.zip, r-release: MSEtool_1.5.0.zip, r-oldrel: MSEtool_1.5.0.zip |
| macOS binaries: | r-prerelease: MSEtool_1.5.0.tgz, r-release: MSEtool_1.5.0.tgz, r-oldrel: MSEtool_1.4.3.tgz |
| Old sources: | MSEtool archive |
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