CRAN Package Check Results for Package reticulate

Last updated on 2020-04-25 01:53:15 CEST.

Check Details

Version: 1.15
Check: installed package size
Result: NOTE
     installed size is 5.0Mb
     sub-directories of 1Mb or more:
     doc 1.1Mb
     libs 3.4Mb
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.15
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘arrays.Rmd’ using rmarkdown
    dyld: lazy symbol binding failed: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    dyld: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    Error: processing vignette 'arrays.Rmd' failed with diagnostics:
    pandoc document conversion failed with error 6
    --- failed re-building ‘arrays.Rmd’
    
    --- re-building ‘calling_python.Rmd’ using rmarkdown
    dyld: lazy symbol binding failed: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    dyld: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    Error: processing vignette 'calling_python.Rmd' failed with diagnostics:
    pandoc document conversion failed with error 6
    --- failed re-building ‘calling_python.Rmd’
    
    --- re-building ‘package.Rmd’ using rmarkdown
    dyld: lazy symbol binding failed: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    dyld: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    Error: processing vignette 'package.Rmd' failed with diagnostics:
    pandoc document conversion failed with error 6
    --- failed re-building ‘package.Rmd’
    
    --- re-building ‘python_dependencies.Rmd’ using rmarkdown
    dyld: lazy symbol binding failed: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    dyld: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    Error: processing vignette 'python_dependencies.Rmd' failed with diagnostics:
    pandoc document conversion failed with error 6
    --- failed re-building ‘python_dependencies.Rmd’
    
    --- re-building ‘python_packages.Rmd’ using rmarkdown
    dyld: lazy symbol binding failed: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    dyld: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    Error: processing vignette 'python_packages.Rmd' failed with diagnostics:
    pandoc document conversion failed with error 6
    --- failed re-building ‘python_packages.Rmd’
    
    --- re-building ‘r_markdown.Rmd’ using rmarkdown
    dyld: lazy symbol binding failed: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    dyld: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    Error: processing vignette 'r_markdown.Rmd' failed with diagnostics:
    pandoc document conversion failed with error 6
    --- failed re-building ‘r_markdown.Rmd’
    
    --- re-building ‘versions.Rmd’ using rmarkdown
    dyld: lazy symbol binding failed: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    dyld: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    Error: processing vignette 'versions.Rmd' failed with diagnostics:
    pandoc document conversion failed with error 6
    --- failed re-building ‘versions.Rmd’
    
    SUMMARY: processing the following files failed:
     ‘arrays.Rmd’ ‘calling_python.Rmd’ ‘package.Rmd’
     ‘python_dependencies.Rmd’ ‘python_packages.Rmd’ ‘r_markdown.Rmd’
     ‘versions.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-osx-x86_64

Version: 1.14
Check: dependencies in R code
Result: NOTE
    Namespace in Imports field not imported from: ‘Matrix’
     All declared Imports should be used.
Flavor: r-oldrel-osx-x86_64

Version: 1.14
Check: tests
Result: ERROR
     Running ‘testthat.R’ [8s/9s]
    Running the tests in ‘tests/testthat.R’ failed.
    Last 13 lines of output:
     ── 3. Error: Properties are automatically converted in inherited classes (@test-
     Typea new-style class can't have only classic bases
     Backtrace:
     1. reticulate::PyClass(...)
     2. bt$type(classname, inherit, do.call(reticulate::dict, defs))
     3. reticulate:::py_call_impl(callable, dots$args, dots$keywords)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 114 | SKIPPED: 42 | WARNINGS: 0 | FAILED: 3 ]
     1. Error: Can inherit from a Python class (@test-python-class.R#57)
     2. Error: Can inherit from multiple Python classes (@test-python-class.R#84)
     3. Error: Properties are automatically converted in inherited classes (@test-python-class.R#166)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-oldrel-osx-x86_64