CRAN Package Check Results for Package pmd

Last updated on 2020-04-25 01:53:12 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.1.5 7.83 98.20 106.03 OK
r-devel-linux-x86_64-debian-gcc 0.1.5 6.72 73.70 80.42 OK
r-devel-linux-x86_64-fedora-clang 0.1.5 139.92 NOTE
r-devel-linux-x86_64-fedora-gcc 0.1.5 133.22 NOTE
r-devel-windows-ix86+x86_64 0.1.5 21.00 108.00 129.00 OK
r-patched-linux-x86_64 0.1.5 8.07 95.74 103.81 OK
r-patched-osx-x86_64 0.1.5 ERROR
r-release-linux-x86_64 0.1.5 7.20 92.77 99.97 OK
r-release-windows-ix86+x86_64 0.1.5 15.00 116.00 131.00 OK
r-release-osx-x86_64 0.1.5 NOTE
r-oldrel-windows-ix86+x86_64 0.1.5 10.00 154.00 164.00 OK
r-oldrel-osx-x86_64 0.1.5 NOTE

Check Details

Version: 0.1.5
Check: dependencies in R code
Result: NOTE
    Namespace in Imports field not imported from: ‘shiny’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-osx-x86_64, r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 0.1.5
Check: data for non-ASCII characters
Result: NOTE
     Note: found 62 marked UTF-8 strings
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-osx-x86_64, r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 0.1.5
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘enviGCMS’
Flavor: r-patched-osx-x86_64

Version: 0.1.5
Check: examples
Result: ERROR
    Running examples in ‘pmd-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: getreact
    > ### Title: Get quantitative paired peaks list for specific reaction/pmd
    > ### Aliases: getreact
    >
    > ### ** Examples
    >
    > data(spmeinvivo)
    > pmd <- getreact(spmeinvivo,pmd=15.99)
    Error in loadNamespace(name) : there is no package called ‘enviGCMS’
    Calls: getreact ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
    Execution halted
Flavor: r-patched-osx-x86_64

Version: 0.1.5
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘globalstd.Rmd’ using rmarkdown
    Quitting from lines 130-134 (globalstd.Rmd)
    Error: processing vignette 'globalstd.Rmd' failed with diagnostics:
    there is no package called 'enviGCMS'
    --- failed re-building ‘globalstd.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘globalstd.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-osx-x86_64