CRAN Package Check Results for Package biolink

Last updated on 2020-04-25 01:52:56 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.1.6 3.85 37.58 41.43 OK
r-devel-linux-x86_64-debian-gcc 0.1.6 3.34 30.09 33.43 OK
r-devel-linux-x86_64-fedora-clang 0.1.6 50.48 OK
r-devel-linux-x86_64-fedora-gcc 0.1.6 51.23 OK
r-devel-windows-ix86+x86_64 0.1.6 16.00 53.00 69.00 OK
r-patched-linux-x86_64 0.1.6 4.37 37.51 41.88 OK
r-patched-osx-x86_64 0.1.6 WARN
r-patched-solaris-x86 0.1.6 89.10 OK
r-release-linux-x86_64 0.1.6 3.93 33.19 37.12 OK
r-release-windows-ix86+x86_64 0.1.6 11.00 47.00 58.00 OK
r-release-osx-x86_64 0.1.6 OK
r-oldrel-windows-ix86+x86_64 0.1.6 4.00 77.00 81.00 OK
r-oldrel-osx-x86_64 0.1.6 OK

Check Details

Version: 0.1.6
Check: whether the package can be unloaded cleanly
Result: WARN
    Error: package or namespace load failed for ‘biolink’ in dyn.load(file, DLLpath = DLLpath, ...):
     unable to load shared object '/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.0/RMySQL/libs/RMySQL.so':
     dlopen(/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.0/RMySQL/libs/RMySQL.so, 6): Symbol not found: _GSS_C_NT_USER_NAME
     Referenced from: /Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.0/RMySQL/libs/RMySQL.so
     Expected in: flat namespace
     in /Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.0/RMySQL/libs/RMySQL.so
    Execution halted
Flavor: r-patched-osx-x86_64

Version: 0.1.6
Check: whether the namespace can be loaded with stated dependencies
Result: WARN
    Error in dyn.load(file, DLLpath = DLLpath, ...) :
     unable to load shared object '/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.0/RMySQL/libs/RMySQL.so':
     dlopen(/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.0/RMySQL/libs/RMySQL.so, 6): Symbol not found: _GSS_C_NT_USER_NAME
     Referenced from: /Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.0/RMySQL/libs/RMySQL.so
     Expected in: flat namespace
     in /Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.0/RMySQL/libs/RMySQL.so
    Calls: <Anonymous> ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
    Execution halted
    
    A namespace must be able to be loaded with just the base namespace
    loaded: otherwise if the namespace gets loaded by a saved object, the
    session will be unable to start.
    
    Probably some imports need to be declared in the NAMESPACE file.
Flavor: r-patched-osx-x86_64

Version: 0.1.6
Check: dependencies in R code
Result: NOTE
    Error: package or namespace load failed for ‘biolink’ in dyn.load(file, DLLpath = DLLpath, ...):
     unable to load shared object '/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.0/RMySQL/libs/RMySQL.so':
     dlopen(/Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.0/RMySQL/libs/RMySQL.so, 6): Symbol not found: _GSS_C_NT_USER_NAME
     Referenced from: /Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.0/RMySQL/libs/RMySQL.so
     Expected in: flat namespace
     in /Volumes/Builds/packages/high-sierra-x86_64/Rlib/4.0/RMySQL/libs/RMySQL.so
    Call sequence:
    6: stop(msg, call. = FALSE, domain = NA)
    5: value[[3L]](cond)
    4: tryCatchOne(expr, names, parentenv, handlers[[1L]])
    3: tryCatchList(expr, classes, parentenv, handlers)
    2: tryCatch({
     attr(package, "LibPath") <- which.lib.loc
     ns <- loadNamespace(package, lib.loc)
     env <- attachNamespace(ns, pos = pos, deps, exclude, include.only)
     }, error = function(e) {
     P <- if (!is.null(cc <- conditionCall(e)))
     past
    Execution halted
Flavor: r-patched-osx-x86_64