CRAN Package Check Results for Package biocompute

Last updated on 2020-04-25 01:52:56 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.3 8.89 64.95 73.84 OK
r-devel-linux-x86_64-debian-gcc 1.0.3 6.60 50.82 57.42 OK
r-devel-linux-x86_64-fedora-clang 1.0.3 66.60 OK
r-devel-linux-x86_64-fedora-gcc 1.0.3 66.90 OK
r-devel-windows-ix86+x86_64 1.0.3 24.00 77.00 101.00 OK
r-patched-linux-x86_64 1.0.3 8.15 65.33 73.48 OK
r-patched-osx-x86_64 1.0.3 WARN
r-patched-solaris-x86 1.0.3 115.90 OK
r-release-linux-x86_64 1.0.3 7.23 62.15 69.38 OK
r-release-windows-ix86+x86_64 1.0.3 18.00 73.00 91.00 OK
r-release-osx-x86_64 1.0.3 OK
r-oldrel-windows-ix86+x86_64 1.0.3 8.00 107.00 115.00 OK
r-oldrel-osx-x86_64 1.0.3 OK

Check Details

Version: 1.0.3
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘case-study.Rmd’ using rmarkdown
    dyld: lazy symbol binding failed: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    dyld: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    Error: processing vignette 'case-study.Rmd' failed with diagnostics:
    pandoc document conversion failed with error 6
    --- failed re-building ‘case-study.Rmd’
    
    --- re-building ‘intro.Rmd’ using rmarkdown
    dyld: lazy symbol binding failed: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    dyld: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    Error: processing vignette 'intro.Rmd' failed with diagnostics:
    pandoc document conversion failed with error 6
    --- failed re-building ‘intro.Rmd’
    
    SUMMARY: processing the following files failed:
     ‘case-study.Rmd’ ‘intro.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-osx-x86_64