CRAN Package Check Results for Package BIGL

Last updated on 2020-04-25 01:52:56 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.4.3 8.74 406.59 415.33 OK
r-devel-linux-x86_64-debian-gcc 1.4.3 7.90 276.26 284.16 OK
r-devel-linux-x86_64-fedora-clang 1.4.3 466.32 OK
r-devel-linux-x86_64-fedora-gcc 1.4.3 473.26 OK
r-devel-windows-ix86+x86_64 1.4.3 27.00 491.00 518.00 OK
r-patched-linux-x86_64 1.4.3 9.05 388.54 397.59 OK
r-patched-osx-x86_64 1.4.3 WARN
r-patched-solaris-x86 1.4.3 415.70 WARN
r-release-linux-x86_64 1.4.3 8.90 364.01 372.91 OK
r-release-windows-ix86+x86_64 1.4.3 28.00 463.00 491.00 OK
r-release-osx-x86_64 1.4.3 WARN
r-oldrel-windows-ix86+x86_64 1.4.3 12.00 497.00 509.00 OK
r-oldrel-osx-x86_64 1.4.3 WARN

Check Details

Version: 1.4.3
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘analysis.Rmd’ using rmarkdown
    Warning: Transformation introduced infinite values in continuous x-axis
    Warning: Transformation introduced infinite values in continuous y-axis
    Warning: Transformation introduced infinite values in continuous x-axis
    Warning: Transformation introduced infinite values in continuous y-axis
    Warning: Removed 199 rows containing non-finite values (stat_contour).
    dyld: lazy symbol binding failed: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    dyld: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    Error: processing vignette 'analysis.Rmd' failed with diagnostics:
    pandoc document conversion failed with error 6
    --- failed re-building ‘analysis.Rmd’
    
    --- re-building ‘methodology.Rmd’ using rmarkdown
    dyld: lazy symbol binding failed: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    dyld: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    Error: processing vignette 'methodology.Rmd' failed with diagnostics:
    pandoc document conversion failed with error 6
    --- failed re-building ‘methodology.Rmd’
    
    SUMMARY: processing the following files failed:
     ‘analysis.Rmd’ ‘methodology.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-osx-x86_64

Version: 1.4.3
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘analysis.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Warning: Transformation introduced infinite values in continuous x-axis
    Warning: Transformation introduced infinite values in continuous y-axis
    Warning: Transformation introduced infinite values in continuous x-axis
    Warning: Transformation introduced infinite values in continuous y-axis
    Warning: Removed 199 rows containing non-finite values (stat_contour).
    Warning in normalizePath(f2) :
     path[1]="webshot279f4fd970f3.png": No such file or directory
    Warning in file(con, "rb") :
     cannot open file 'webshot279f4fd970f3.png': No such file or directory
    Quitting from lines 245-248 (analysis.Rmd)
    Error: processing vignette 'analysis.Rmd' failed with diagnostics:
    cannot open the connection
    --- failed re-building ‘analysis.Rmd’
    
    --- re-building ‘methodology.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    --- finished re-building ‘methodology.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘analysis.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86

Version: 1.4.3
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 1.4.3
Check: dependencies in R code
Result: NOTE
    No protocol specified
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 1.4.3
Check: S3 generic/method consistency
Result: WARN
    No protocol specified
    See section ‘Generic functions and methods’ in the ‘Writing R
    Extensions’ manual.
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 1.4.3
Check: replacement functions
Result: WARN
    No protocol specified
    The argument of a replacement function which corresponds to the right
    hand side must be named ‘value’.
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 1.4.3
Check: foreign function calls
Result: NOTE
    No protocol specified
    See chapter ‘System and foreign language interfaces’ in the ‘Writing R
    Extensions’ manual.
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 1.4.3
Check: R code for possible problems
Result: NOTE
    No protocol specified
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 1.4.3
Check: for missing documentation entries
Result: WARN
    No protocol specified
    All user-level objects in a package should have documentation entries.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 1.4.3
Check: for code/documentation mismatches
Result: WARN
    No protocol specified
    No protocol specified
    No protocol specified
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 1.4.3
Check: Rd \usage sections
Result: NOTE
    No protocol specified
    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 1.4.3
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘analysis.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    No protocol specified
    Warning: Transformation introduced infinite values in continuous x-axis
    Warning: Transformation introduced infinite values in continuous y-axis
    Warning: Transformation introduced infinite values in continuous x-axis
    Warning: Transformation introduced infinite values in continuous y-axis
    Warning: Removed 199 rows containing non-finite values (stat_contour).
    Warning in normalizePath(f2) :
     path[1]="webshot142971fec70e2.png": No such file or directory
    Warning in file(con, "rb") :
     cannot open file 'webshot142971fec70e2.png': No such file or directory
    Quitting from lines 245-248 (analysis.Rmd)
    Error: processing vignette 'analysis.Rmd' failed with diagnostics:
    cannot open the connection
    --- failed re-building ‘analysis.Rmd’
    
    --- re-building ‘methodology.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    --- finished re-building ‘methodology.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘analysis.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-release-osx-x86_64

Version: 1.4.3
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    No protocol specified
    Warning: Transformation introduced infinite values in continuous x-axis
    Warning: Transformation introduced infinite values in continuous y-axis
    Warning: Transformation introduced infinite values in continuous x-axis
    Warning: Transformation introduced infinite values in continuous y-axis
    Warning: Removed 199 rows containing non-finite values (stat_contour).
    Warning in normalizePath(f2) :
     path[1]="webshot2d386a70aee6.png": No such file or directory
    Warning in file(con, "rb") :
     cannot open file 'webshot2d386a70aee6.png': No such file or directory
    Quitting from lines 245-248 (analysis.Rmd)
    Error: processing vignette 'analysis.Rmd' failed with diagnostics:
    cannot open the connection
    Execution halted
Flavor: r-oldrel-osx-x86_64