PhysActBedRest: Marks Periods of 'Bedrest' in Actigraph Accelerometer Data

Contains a function to categorize accelerometer readings collected in free-living (e.g., for 24 hours/day for 7 days), preprocessed and compressed as counts (unit-less value) in a specified time period termed epoch (e.g., 1 minute) as either bedrest (sleep) or active. The input is a matrix with a timestamp column and a column with number of counts per epoch. The output is the same dataframe with an additional column termed bedrest. In the bedrest column each line (epoch) contains a function-generated classification 'br' or 'a' denoting bedrest/sleep and activity, respectively. The package is designed to be used after wear/nonwear marking function in the 'PhysicalActivity' package.

Version: 1.0
Depends: R (≥ 2.10), chron, stringr
Imports: lubridate
Published: 2016-04-06
Author: J. Dustin Tracy, Zhiyi Xu, Sari Acra, Kong Y. Chen, Maciej S. Buchowski
Maintainer: J. Dustin Tracy <jtracy2 at>
License: GPL (≥ 3)
NeedsCompilation: no
CRAN checks: PhysActBedRest results


Reference manual: PhysActBedRest.pdf
Package source: PhysActBedRest_1.0.tar.gz
Windows binaries: r-devel:, r-devel-gcc8:, r-release:, r-oldrel:
OS X binaries: r-release: PhysActBedRest_1.0.tgz, r-oldrel: PhysActBedRest_1.0.tgz


Please use the canonical form to link to this page.