CRAN Package Check Results for Package pmc

Last updated on 2020-01-27 00:48:12 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.3 6.06 193.41 199.47 OK --no-vignettes
r-devel-linux-x86_64-debian-gcc 1.0.3 4.34 137.42 141.76 OK --no-vignettes
r-devel-linux-x86_64-fedora-clang 1.0.3 1336.19 OK
r-devel-linux-x86_64-fedora-gcc 1.0.3 1282.71 OK
r-devel-windows-ix86+x86_64 1.0.3 14.00 234.00 248.00 OK --no-vignettes
r-devel-windows-ix86+x86_64-gcc8 1.0.3 26.00 233.00 259.00 OK --no-vignettes
r-patched-linux-x86_64 1.0.3 4.58 170.75 175.33 OK --no-vignettes
r-patched-solaris-x86 1.0.3 1214.10 OK
r-release-linux-x86_64 1.0.3 5.02 175.23 180.25 OK --no-vignettes
r-release-windows-ix86+x86_64 1.0.3 11.00 329.00 340.00 OK --no-vignettes
r-release-osx-x86_64 1.0.3 FAIL
r-oldrel-windows-ix86+x86_64 1.0.3 7.00 214.00 221.00 OK --no-vignettes
r-oldrel-osx-x86_64 1.0.3 OK

Check Details

Version: 1.0.3
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘pmc_tutorial.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Loading required package: ape
    Loading required package: subplex
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    
    Attaching package: 'gridExtra'
    
    The following object is masked from 'package:dplyr':
    
     combine
    
    Warning in fitContinuous(phy = att$cache$phy, model = att$model, ..., ncores = 1) :
     Parameter estimates appear at bounds:
     lambda
    Warning in fitContinuous(phy = att$cache$phy, model = att$model, ..., ncores = 1) :
     Parameter estimates appear at bounds:
     lambda
    Warning in fitContinuous(phy = att$cache$phy, model = att$model, ..., ncores = 1) :
     Parameter estimates appear at bounds:
     lambda
    Warning in fitContinuous(phy = att$cache$phy, model = att$model, ..., ncores = 1) :
     Parameter estimates appear at bounds:
     lambda
    
    Execution halted
Flavor: r-release-osx-x86_64

Version: 1.0.3
Check: PDF version of manual
Result: FAIL
Flavor: r-release-osx-x86_64