Tools for the exploration of distributions of phylogenetic trees. This package includes a shiny interface which can be started from R using 'treescapeServer()'.

Maintainer: Michelle Kendall <m.kendall at imperial.ac.uk>

Author(s): Thibaut Jombart*, Michelle Kendall*, Jacob Almagro-Garcia*, Caroline Colijn*

Install package and any missing dependencies by running this line in your R console:

install.packages("treescape")

Depends R (>= 3.1.2), ape, ade4
Imports adegenet, adegraphics, adephylo, combinat, compiler, distory, fields, htmlwidgets, MASS, phangorn, Rcpp, rgl, RLumShiny, scatterD3, shiny, shinyBS, utils
Suggests igraph, RColorBrewer, ggplot2, testthat, knitr, rmarkdown
Enhances
Linking to Rcpp
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Package treescape
Materials
URL
Task Views
Version 1.10.18
Published 2016-12-08
License GPL (>= 2)
BugReports
SystemRequirements
NeedsCompilation yes
Citation
CRAN checks treescape check results
Package source treescape_1.10.18.tar.gz