Implementation of ADMIXTURE for individual ancestry inference in R. Specifically, ADMIXTURE is a software tool for maximum likelihood estimation of individual ancestries from multilocus SNP genotype datasets, see . Users can use 'radmixture' to calculate ancestry components with different public datasets. It is very convenient and fast for personal genotype data. For more details, see .

Documentation

Manual: radmixture.pdf
Vignette: Introduction

Maintainer: Beilei Bian <bianbeilei at wegene.com>

Author(s): Beilei Bian*, Dajun Luo* (R's C API), Gang Chen*, Senwei Tang*, WeGene*

Install package and any missing dependencies by running this line in your R console:

install.packages("radmixture")

Depends R (>= 3.1.0)
Imports quadprog, plyr, magrittr, MCMCpack
Suggests rmarkdown, knitr, testthat
Enhances
Linking to
Reverse
depends
Reverse
imports
Reverse
suggests
Reverse
enhances
Reverse
linking to

Package radmixture
Materials
URL https://github.com/wegene-llc/radmixture
Task Views
Version 0.0.1
Published 2017-03-13
License MIT + file LICENSE
BugReports https://github.com/wegene-llc/radmixture/issues
SystemRequirements
NeedsCompilation yes
Citation
CRAN checks radmixture check results
Package source radmixture_0.0.1.tar.gz