An implementation of the nodiv algorithm, see Borregaard, M.K., Rahbek, C., Fjeldsaa, J., Parra, J.L., Whittaker, R.J. & Graham, C.H. 2014. Node-based analysis of species distributions. Methods in Ecology and Evolution 5(11): 1225-1235. . Package for phylogenetic analysis of species distributions. The main function goes through each node in the phylogeny, compares the distributions of the two descendant nodes, and compares the result to a null model. This highlights nodes where major distributional divergence have occurred. The distributional divergence for these nodes is mapped using the SOS statistic.

Documentation

Manual: nodiv.pdf
Vignette: None available.

Maintainer: Michael Krabbe Borregaard <mkborregaard at snm.ku.dk>

Author(s): Michael Krabbe Borregaard

Install package and any missing dependencies by running this line in your R console:

install.packages("nodiv")

Depends R (>= 3.0)
Imports picante, raster, ape, sp, vegan, utils
Suggests RColorBrewer, parallel, testthat, colorspace
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Package nodiv
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Version 1.1.6
Published 2017-02-27
License GPL-3
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NeedsCompilation no
Citation
CRAN checks nodiv check results
Package source nodiv_1.1.6.tar.gz