An interface to explore, analyze, and visualize droplet digital PCR (ddPCR) data in R. This is the first non-proprietary software for analyzing two-channel ddPCR data. An interactive tool was also created and is available online to facilitate this analysis for anyone who is not comfortable with using R.

Maintainer: Dean Attali <daattali at gmail.com>

Author(s): Dean Attali*

Install package and any missing dependencies by running this line in your R console:

install.packages("ddpcr")

Depends R (>= 3.1.0)
Imports DT(>=0.2), dplyr(>=0.5.0), ggplot2(>=2.2.0), lazyeval(>=0.1.10), magrittr(>=1.5), mixtools(>=1.0.2), plyr(>=1.8.1), readr(>=0.1.0), shiny(>=0.11.0), shinyjs(>=0.4.0)
Suggests ggExtra(>=0.3.0), graphics, grid (>= 3.2.2), gridExtra(>=2.0.0), knitr(>=1.7), rmarkdown, stats, testthat(>=0.11.0), utils
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Package ddpcr
Materials
URL https://github.com/daattali/ddpcr
Task Views
Version 1.6
Published 2016-11-12
License MIT + file LICENSE
BugReports https://github.com/daattali/ddpcr/issues
SystemRequirements
NeedsCompilation no
Citation
CRAN checks ddpcr check results
Package source ddpcr_1.6.tar.gz