BRIC-seq is a genome-wide approach for determining RNA stability in mammalian cells. This package provides a series of functions for performing quality check of your BRIC-seq data, calculation of RNA half-life for each transcript and comparison of RNA half-lives between two conditions.

Documentation

Manual: bridger2.pdf
Vignette: None available.

Maintainer: Naoto Imamachi <naoto.imamachi at gmail.com>

Author(s): Naoto Imamachi*

Install package and any missing dependencies by running this line in your R console:

install.packages("bridger2")

Depends R (>= 3.3.1)
Imports data.table, ggplot2, shiny, shinydashboard, plotly, BSDA, outliers
Suggests testthat
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Package bridger2
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Version 0.1.0
Published 2016-12-05
License MIT + file LICENSE
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NeedsCompilation no
Citation
CRAN checks bridger2 check results
Package source bridger2_0.1.0.tar.gz