Provides the 'ImageJ' 'Auto Threshold' plugin functionality to R users. See and Landini et al. (2017) .

Documentation

Manual: autothresholdr.pdf
Vignette: autothresholdr

Maintainer: Rory Nolan <rorynoolan at gmail.com>

Author(s): Rory Nolan*, Luis Alvarez*, Sergi Padilla-Parra*, Gabriel Landini*

Install package and any missing dependencies by running this line in your R console:

install.packages("autothresholdr")

Depends
Imports rJava, RSAGA, magrittr, EBImage, Rcpp
Suggests testthat, covr, knitr, rmarkdown
Enhances
Linking to Rcpp
Reverse
depends
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imports
nandb
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suggests
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enhances
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linking to

Package autothresholdr
Materials
URL https://www.github.com/rorynolan/autothresholdr
Task Views
Version 0.5.0
Published 2017-05-17
License GPL-3
BugReports https://www.github.com/rorynolan/autothresholdr/issues
SystemRequirements Java
NeedsCompilation yes
Citation
CRAN checks autothresholdr check results
Package source autothresholdr_0.5.0.tar.gz