Toolkit for the analysis of multiple gene data. Apex implements the new S4 classes 'multidna', 'multiphyDat' and associated methods to handle aligned DNA sequences from multiple genes.

Maintainer: Thibaut Jombart <t.jombart at imperial.ac.uk>

Author(s): Thibaut Jombart*, Zhian Namir Kamvar*, Klaus Schliep*, Eric Archer*, Rebecca Harris*

Install package and any missing dependencies by running this line in your R console:

install.packages("apex")

Depends R (>= 3.1.3), methods, ape, phangorn
Imports utils, graphics, stats, grDevices, adegenet
Suggests testthat, knitr, rmarkdown
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Package apex
Materials
URL https://github.com/thibautjombart/apex
Task Views
Version 1.0.2
Published 2016-12-05
License GPL (>= 2)
BugReports https://github.com/thibautjombart/apex/issues
SystemRequirements
NeedsCompilation no
Citation
CRAN checks apex check results
Package source apex_1.0.2.tar.gz