R version of 'GenClone' (a computer program to analyse genotypic data, test for clonality and describe spatial clonal organization, Arnaud-Haond & Belkhir 2007, ), this package allows clone handling as 'GenClone' does, plus the possibility to work with several populations, MultiLocus Lineages (MLL) custom definition and use, and p-value calculation for psex statistic (probability of originating from distinct sexual events) and psex_Fis statistic (taking account of Hardy-Weinberg equilibrium departure) as 'MLGsim'/'MLGsim2' (a program for detecting clones using a simulation approach, Stenberg et al. 2003).

Documentation

Manual: RClone.pdf
Vignettes:

Maintainer: Diane Bailleul <diane.bailleul.pro at gmail.com>

Author(s): Sophie Arnaud-Haond*, Diane Bailleul*, Solenn Stoeckel*

Install package and any missing dependencies by running this line in your R console:

install.packages("RClone")

Depends R (>= 3.2.0), graphics, stats, grDevices, utils, datasets, methods
Imports
Suggests knitr, pander, testthat
Enhances
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imports
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suggests
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linking to

Package RClone
Materials
URL https://github.com/dbailleul/RClone
Task Views
Version 1.0.2
Published 2016-06-06
License GPL (>= 2.0)
BugReports
SystemRequirements
NeedsCompilation no
Citation
CRAN checks RClone check results
Package source RClone_1.0.2.tar.gz