An implementation of the network fingerprint framework that introduced in paper "Network fingerprint: a knowledge-based characterization of biomedical networks" (Cui, 2015) . This method worked by making systematic comparisons to a set of well-studied "basic networks", measuring both the functional and topological similarity. A biological could be characterized as a spectrum-like vector consisting of similarities to basic networks. It shows great potential in biological network study.

Documentation

Manual: NFP.pdf
Vignette: NFP

Maintainer: Yang Cao <yiluheihei at gmail.com>

Author(s): Yang Cao*, Fei Li*

Install package and any missing dependencies by running this line in your R console:

install.packages("NFP")

Depends R (>= 3.2.0), graph
Imports igraph, stringr, magrittr, plyr, ggplot2, apcluster, KEGGgraph, dplyr, tidyr, methods
Suggests knitr, testthat, BiocStyle, graphite, NFPdata
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Package NFP
Materials
URL https://github.com/yiluheihei/NFP
Task Views
Version 0.99.2
Published 2016-11-21
License GPL (>= 2)
BugReports https://github.com/yiluheihei/NFP/issues
SystemRequirements
NeedsCompilation no
Citation
CRAN checks NFP check results
Package source NFP_0.99.2.tar.gz