Functions for reading (tab, csv, Bruker fid, Ciphergen XML, mzXML, mzML, imzML, Analyze 7.5, CDF, mMass MSD) and writing (tab, csv, mMass MSD, mzML, imzML) different file formats of mass spectrometry data into/from MALDIquant objects.

Maintainer: Sebastian Gibb <mail at sebastiangibb.de>

Author(s): Sebastian Gibb*, Pietro Franceschi*

Install package and any missing dependencies by running this line in your R console:

install.packages("MALDIquantForeign")

Depends R (>= 3.2.2), methods, MALDIquant(>=1.11.7)
Imports base64enc, digest, readBrukerFlexData(>=1.7), readMzXmlData(>=2.7), XML
Suggests knitr, testthat(>=0.8), RNetCDF(>=1.6.1)
Enhances
Linking to
Reverse
depends
Reverse
imports
Reverse
suggests
Reverse
enhances
Reverse
linking to

Package MALDIquantForeign
Materials
URL http://strimmerlab.org/software/maldiquant/ https://github.com/sgibb/MALDIquantForeign/
Task Views
Version 0.10
Published 2015-11-01
License GPL (>= 3)
BugReports https://github.com/sgibb/MALDIquantForeign/issues/
SystemRequirements
NeedsCompilation no
Citation
CRAN checks MALDIquantForeign check results
Package source MALDIquantForeign_0.10.tar.gz