A complete analysis pipeline for matrix-assisted laser desorption/ionization-time-of-flight (MALDI-TOF) and other two-dimensional mass spectrometry data. In addition to commonly used plotting and processing methods it includes distinctive features, namely baseline subtraction methods such as morphological filters (TopHat) or the statistics-sensitive non-linear iterative peak-clipping algorithm (SNIP), peak alignment using warping functions, handling of replicated measurements as well as allowing spectra with different resolutions.

Maintainer: Sebastian Gibb <mail at sebastiangibb.de>

Author(s): Sebastian Gibb*, Korbinian Strimmer*

Install package and any missing dependencies by running this line in your R console:

install.packages("MALDIquant")

Depends R (>= 3.2.0), methods
Imports parallel
Suggests knitr, testthat(>=0.8)
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MALDIquantForeign
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Package MALDIquant
Materials
URL http://strimmerlab.org/software/maldiquant/ https://github.com/sgibb/MALDIquant/
Task Views ChemPhys
Version 1.16.1
Published 2017-01-11
License GPL (>= 3)
BugReports https://github.com/sgibb/MALDIquant/issues/
SystemRequirements
NeedsCompilation yes
Citation
CRAN checks MALDIquant check results
Package source MALDIquant_1.16.1.tar.gz