Analysis algorithms extracted from the original 'campari' software package. They consists in a kinetic annotation of the trajectory based on the minimum spanning tree constructed on the distances between snapshots. The fast algorithm is implemented on the basis of a modified version of the birch algorithm, while the slow one is based on a simple leader clustering. For more information please visit the original documentation on .

Documentation

Manual: CampaR1.pdf
Vignette: None available.

Maintainer: Garolini Davide <d.garolini at bioc.uzh.ch>

Author(s): Garolini Davide

Install package and any missing dependencies by running this line in your R console:

install.packages("CampaR1")

Depends R (>= 3.1.0)
Imports bio3d, ggplot2
Suggests testthat
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Package CampaR1
Materials
URL https://github.com/Melkiades/CampaR1 http://campari.sourceforge.net/index.html
Task Views
Version 0.8.4
Published 2017-01-10
License GPL (>= 3)
BugReports https://github.com/Melkiades/CampaR1/issues
SystemRequirements
NeedsCompilation yes
Citation
CRAN checks CampaR1 check results
Package source CampaR1_0.8.4.tar.gz