An implementation of permutation tests in R, supporting both exact and asymptotic K sample test of data locations. The p value of exact tests is found using tree algorithms. Tree algorithms treat permutations of input data as tree nodes and perform constraint depth-first searches for permutations that fall into the critical region of a test systematically. Pruning of tree search and optimisations at C level enable exact tests for certain large data sets.

Documentation

Manual: treeperm.pdf
Vignette: None available.

Maintainer: Qiao Kang <qk at st-andrews.ac.uk>

Author(s): Qiao Kang <qk at st-andrews.ac.uk>

Install package and any missing dependencies by running this line in your R console:

install.packages("treeperm")

Depends R (>= 2.14.1)
Imports
Suggests
Enhances
Linking to
Reverse
depends
Reverse
imports
Reverse
suggests
Reverse
enhances
Reverse
linking to

Package treeperm
Materials
URL
Task Views
Version 1.6
Published 2015-04-22
License GPL-2
BugReports
SystemRequirements
NeedsCompilation yes
Citation
CRAN checks treeperm check results
Package source treeperm_1.6.tar.gz