A set of tools for performing graph theory analysis of brain MRI data. It is best suited to data from a Freesurfer analysis (cortical thickness, volumes, local gyrification index, surface area), but also works with e.g., tractography data from FSL and fMRI data from DPABI. It contains a graphical user interface for graph visualization and data exploration and several functions for generating useful figures.

Documentation

Manual: brainGraph.pdf
Vignette: None available.

Maintainer: Christopher G. Watson <cgwatson at bu.edu>

Author(s): Christopher G. Watson <cgwatson at bu.edu>

Install package and any missing dependencies by running this line in your R console:

install.packages("brainGraph")

Depends R (>= 3.0.0), igraph(>=1.0.0), RGtk2, cairoDevice
Imports abind, ade4, boot, data.table, foreach, ggplot2, Hmisc, methods, oro.nifti, permute, parallel, plyr, RcppEigen, scales
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Package brainGraph
Materials
URL https://github.com/cwatson/brainGraph
Task Views
Version 1.0.0
Published 2017-04-10
License GPL-3
BugReports https://groups.google.com/forum/?hl=en#!forum/brainGraph-help
SystemRequirements
NeedsCompilation no
Citation
CRAN checks brainGraph check results
Package source brainGraph_1.0.0.tar.gz